Fabrice Armougom

2023

• Adaptation Strategies to High Hydrostatic Pressures in Pseudothermotoga species Revealed by Transcriptional Analyses

  Authors : Fenouil Romain, Pradel Nathalie, Belahbib Hassiba, Roumagnac Marie, Bartoli Manon, Ben Hania Wajdi, Denis Yann, Garel Marc, Tamburini C., Ollivier Bernard, Summers Zarath, Armougom Fabrice, Dolla Alain,
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• Phage-Host Prediction Using a Computational Tool Coupled with 16S rRNA Gene Amplicon Sequencing

  Authors : Andrianjakarivony Harilanto Felana, Bettarel Yvan, Armougom Fabrice, Desnues Christelle,
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2021

• Increasing Hydrostatic Pressure Impacts the Prokaryotic Diversity during Emiliania huxleyi Aggregates Degradation

  Authors : Tamburini Christian, Garel Marc, Barani Aude, Boeuf Dominique, Bonin Patricia, Bhairy Nagib, Guasco Sophie, Jacquet Stéphanie, Le Moigne Frédéric A.C., Panagiotopoulos Christos, Riou Virginie, Veloso Sandrine, Santinelli Chiara, Armougom Fabrice,
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• Mesopelagic microbial carbon production correlates with diversity across different marine particle fractions

  Authors : Baumas Chloé, Le Moigne Frédéric, Garel Marc, Bhairy Nagib, Guasco Sophie, Riou Virginie, Armougom Fabrice, Grossart Hans-Peter, Tamburini Christian,
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• Bacterial diversity and lipid biomarkers in sea ice and sinking particulate organic material during the melt season in the Canadian Arctic

  Authors : Amiraux Rémi, Rontani Jean-Francois, Armougom Fabrice, Frouin Eléonore, Babin Marcel, Artigue Lise, Bonin Patricia,
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2020

• Responses to the Hydrostatic Pressure of Surface and Subsurface Strains of Pseudothermotoga elfii Revealing the Piezophilic Nature of the Strain Originating From an Oil-Producing Well

  Authors : Roumagnac Marie, Pradel Nathalie, Bartoli Manon, Garel Marc, Jones Aaron, Armougom Fabrice, Fenouil Romain, Tamburini Christian, Ollivier Bernard, Summers Zarath, Dolla Alain,
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• Prokaryotic Diversity and Distribution Along Physical and Nutrient Gradients in the Tunisian Coastal Waters (South Mediterranean Sea)

  Authors : Quemeneur Marianne, Bel Hassen Malika, Armougom Fabrice, Khammeri Yosra, Lajnef Rim, Bellaaj-Zouari Amel,
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• In situ observations and modelling revealed environmental factors favouring occurrence of Vibrio in microbiome of the pelagic Sargassum responsible for strandings

  Authors : Michotey Valerie, Blanfuné Aurelie, Chevalier Cristele, Garel Marc, Diaz Frédéric, Berline Léo, Le Grand Louis, Armougom Fabrice, Guasco Sophie, Ruitton Sandrine, Changeux T., Belloni Bruno, Blanchot Jean, Ménard Frédéric, Thibaut Thierry,
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• A novel Thermotoga strain TFO isolated from a Californian petroleum reservoir phylogenetically related to Thermotoga petrophila and T. naphthophila, two thermophilic anaerobic isolates from a Japanese reservoir: Taxonomic and genomic considerations

  Authors : Summers Zara M, Belahbib Hassiba, Pradel Nathalie, Bartoli Manon, Mishra Pooja, Tamburini Christian, Dolla Alain, Ollivier Bernard, Armougom Fabrice,
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2019

• Pressure-Retaining Sampler and High-Pressure Systems to Study Deep-Sea Microbes Under in situ Conditions

  Authors : Garel Marc, Bonin Patricia, Martini Severine, Guasco Sophie, Roumagnac Marie, Bhairy Nagib, Armougom Fabrice, Tamburini Christian,
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2018

• Towards a congruent reclassification and nomenclature of the thermophilic species of the genus Pseudothermotoga within the order Thermotogales

  Authors : Belahbib Hassiba, Summers Zarath, Fardeau Marie-Laure, Joseph Manon, Tamburini Christian, Dolla Alain, Ollivier Bernard, Armougom Fabrice,
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• Abundance and diversity of prokaryotes in ephemeral hypersaline lake Chott El Jerid using Illumina Miseq sequencing, DGGE and qPCR assays

  Authors : Ben Abdallah Manel, Karray Fatma, Kallel Najwa, Armougom Fabrice, Mhiri Najla, Quemeneur Marianne, Cayol Jean-Luc, Erauso Gaël, Sayadi Sami,
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• The nature of electron acceptor (MnIV/NO3) triggers differential expression of genes associated with stress and ammonium limitation responses in Shewanella algae C6G3

  Authors : Aigle Axel, Bonin Patricia, -Nunez Nicolas Fernandez, Loriod Béatrice B., Guasco Sophie, Bergon Aurélie, Armougom Fabrice, Iobbi-Nivol Chantal, Imbert Jean, Michotey Valerie,
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• Salinity shifts in marine sediment: Importance of number of fluctuation rather than their intensities on bacterial denitrifying community

  Authors : Zaghmouri Imen, Michotey Valerie, Armougom Fabrice, Guasco Sophie, Bonin Patricia,
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• Diversity of rare and abundant prokaryotic phylotypes in the Prony hydrothermal field and comparison with other serpentinite-hosted ecosystems

  Authors : Frouin Eléonore E, Bes Méline, Ollivier Bernard, Quéméneur Marianne, Postec Anne, Debroas Didier, Armougom Fabrice, Erauso Gaël,
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• Obligate sugar oxidation in Mesotoga spp., phylum Thermotogae , in the presence of either elemental sulfur or hydrogenotrophic sulfate-reducers as electron acceptor

  Authors : Fadhlaoui Khaled, Ben Hania Wagdi, Armougom Fabrice, Joseph Manon, Fardeau Marie-Laure, Erauso Gaël, Brasseur Gael, Aubert Corinne, Hamdi Moktar, Brochier-Armanet Céline, Dolla Alain, Ollivier Bernard,
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2017

• Microbial Diversity in Sulfate-Reducing Marine Sediment Enrichment Cultures Associated with Anaerobic Biotransformation of Coastal Stockpiled Phosphogypsum (Sfax, Tunisia)

  Authors : Zouch Hana, Karray Fatma, Armougom Fabrice, Chifflet Sandrine, Hirschler-Réa Agnès, Kharrat Hanen, Kamoun Lotfi, Ben Hania Wajdi, Ollivier Bernard, Sayadi Sami, Quéméneur Marianne,
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• Dental pulp as a source of low-contaminated DNA

  Authors : Drancourt Michel, Aboudharam Gerard, Croce Olivier, Armougom Fabrice, Robert Catherine, Raoult Didier,
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2016

• Glycans affect DNA extraction and induce substantial differences in gut metagenomic studies

  Authors : Angelakis Emmanouil, Bachar Dipankar, Henrissat Bernard, Armougom Fabrice, Audoly Gilles, Lagier Jean-Christophe J.-C., Robert Catherine, Raoult Didier,
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• Genomic Insights into a new Citrobacter koseri strain revealed gene exchanges with the virulence-associated Yersinia pestis pPCP1 plasmid

  Authors : Armougom Fabrice, Bitam Idir, Croce Olivier, Merhej Vicky, Barassi Lina, Nguyen Ti-Thien, La Scola Bernard, Raoult Didier,
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• Increased Gut Redox and Depletion of Anaerobic and Methanogenic Prokaryotes in Severe Acute Malnutrition

  Authors : Million Matthieu, Alou Maryam Tidjani, Khelaifia Saber, Bachar Dipankar, Lagier Jean-Christophe J.-C., Dione Niokhor, Brah Souleymane, Hugon Perrine, Lombard Vincent, Armougom Fabrice, Fromonot Julien, Robert Catherine, Michelle Caroline, Diallo Aldiouma, Fabre Alexandre, Guieu Régis, Sokhna Cheikh, Henrissat Bernard, Parola Philippe, Raoult Didier,
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2015

• A Metagenomic Investigation of the Duodenal Microbiota Reveals Links with Obesity

  Authors : Angelakis Emmanouil, Armougom F., Carrière Frédéric, Bachar Dipankar, Laugier René, Lagier Jean-Christophe J.-C., Robert Catherine, Michelle Caroline, Henrissat Bernard, Raoult Didier,
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2014

• Identification of Bacterial Strains Isolated from the Mediterranean Sea Exhibiting Different Abilities of Biofilm Formation

  Authors : Brian-Jaisson Florence, Ortalo-Magné Annick, Guentas-Dombrowsky Linda, Armougom Fabrice, Blache Yves, Molmeret Maëlle,
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• Polyphasic analysis of a middle ages coprolite microbiota, Belgium

  Authors : Appelt Sandra, Armougom Fabrice, Le Bailly Matthieu, Robert Catherine, Drancourt Michel,
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2013

• Evidence of the megavirome in humans

  Authors : Colson Philippe, Fancello Laura, Gimenez Gregory, Armougom Fabrice, Desnues Christelle, Fournous Ghislain, Yoosuf Niyaz, Million Matthieu, La Scola Bernard, Raoult Didier,
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• Development and Validation of a Microarray for the Investigation of the CAZymes Encoded by the Human Gut Microbiome

  Authors : Kaoutari Abdessamad El, Armougom Fabrice, Leroy Quentin, Vialettes Bernard, Million Matthieu, Raoult Didier, Henrissat Bernard,
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• Culturomics identified 11 new bacterial species from a single anorexia nervosa stool sample

  Authors : Pfleiderer A. A., Lagier J.-C. J.-C., Armougom Fabrice, Robert C. C., Vialettes B. B., Raoult Didier,
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2012

• Microbial culturomics: paradigm shift in the human gut microbiome study

  Authors : Lagier C., Armougom Fabrice, Million M., Hugon P., Pagnier I., Robert Cédric Robert, Bittar F., Fournous G., Gimenez G., Maraninchi M., Trape J.-F., Koonin E.V., La Scola B., Raoult Didier,
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• Comparative meta-analysis of the effect of Lactobacillus species on weight gain in humans and animals

  Authors : Million Matthieu, Angelakis Emmanouil, Paul Mical, Armougom Fabrice, Leibovici Leonard, Raoult Didier,
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• Microbial culturomics: paradigm shift in the human gut microbiome study

  Authors : Armougom Fabrice, Million Matthieu, Hugon P. P., Pagnier I. I., Robert C. C., Bittar F. F., Fournous G. G., Gimenez G. G., Maraninchi Marie M., Trape Jean-François, Koonin E. V. E. V., La Scola B. B., Raoult Didier, Lagier Jean-Christophe,
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2011

• Genomotyping of Coxiella burnetii using microarrays reveals a conserved genomotype for hard tick isolates

  Authors : Leroy Quentin, Armougom Fabrice, Barbry Pascal, Raoult Didier,
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2010

• Coxiella burnetii transcriptional analysis reveals serendipity clusters of regulation in intracellular bacteria

  Authors : Leroy Quentin, Lebrigand Kevin, Armougom Fabrice, Barbry Pascal, Thiéry Richard, Raoult Didier,
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2009

• Microbial diversity in the sputum of a cystic fibrosis patient studied with 16S rDNA pyrosequencing

  Authors : Armougom Fabrice, Bittar F., Stremler N., Rolain J., Robert Cédric Robert, Dubus J., Sarles J., Raoult Didier, Scola B.,
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